Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gm9987-201ENSMUST00000069768 567 ntBASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Gm25406-201ENSMUST00000157599 105 ntBASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-5A0A075B6B5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Celf4-206ENSMUST00000224553 1729 ntBASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-5A0A075B6B5 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms