Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm27742-201ENSMUST00000184667 60 ntBASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm21362-201ENSMUST00000194272 928 ntBASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6n-6A0A075B6B2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6n-6A0A075B6B2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm36967-201ENSMUST00000193814 266 ntBASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6n-6A0A075B6B2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms