Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 AC159093.1-201ENSMUST00000227779 380 ntBASIC12□□□□□ -0.49
Trav17A0A075B655 AC117588.1-201ENSMUST00000228510 999 ntBASIC12□□□□□ -0.49
Trav17A0A075B655 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav17A0A075B655 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Gm37297-201ENSMUST00000192974 2384 ntBASIC12□□□□□ -0.49
Trav17A0A075B655 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12□□□□□ -0.49
Trav17A0A075B655 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav17A0A075B655 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12□□□□□ -0.49
Trav17A0A075B655 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm6433-201ENSMUST00000118634 875 ntBASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.99□□□□□ -0.49
Trav17A0A075B655 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.99□□□□□ -0.49
Trav17A0A075B655 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav17A0A075B655 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.98□□□□□ -0.49
Trav17A0A075B655 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm11950-201ENSMUST00000121615 838 ntBASIC11.98□□□□□ -0.49
Trav17A0A075B655 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm5587-201ENSMUST00000206270 674 ntBASIC11.98□□□□□ -0.49
Trav17A0A075B655 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm45328-201ENSMUST00000210942 917 ntBASIC11.98□□□□□ -0.49
Trav17A0A075B655 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms