Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gm7730-201ENSMUST00000212486 454 ntBASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gm2423-201ENSMUST00000074863 733 ntBASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav8n-2A0A075B633 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Gm18766-201ENSMUST00000189811 808 ntBASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8n-2A0A075B633 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Gm44344-201ENSMUST00000200287 129 ntBASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms