Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Gm45167-201ENSMUST00000208007 322 ntBASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav10nA0A075B622 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.4□□□□□ -0.27
Trav10nA0A075B622 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Trav10nA0A075B622 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm7787-201ENSMUST00000216858 688 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 AV026068-213ENSMUST00000223675 1171 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm15590-201ENSMUST00000078419 552 ntBASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav10nA0A075B622 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm18195-201ENSMUST00000207604 706 ntBASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav10nA0A075B622 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms