Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm18733-201ENSMUST00000173950 856 ntBASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm27628-201ENSMUST00000184911 107 ntBASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm18246-201ENSMUST00000221023 728 ntBASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ighv1-55A0A075B5W6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ighv1-55A0A075B5W6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ighv1-55A0A075B5W6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ighv1-55A0A075B5W6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms