Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ccr9Q9WUT7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Celf4-206ENSMUST00000224553 1729 ntBASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr9Q9WUT7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr9Q9WUT7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr9Q9WUT7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr9Q9WUT7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr9Q9WUT7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr9Q9WUT7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Gm18669-201ENSMUST00000216049 778 ntBASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr9Q9WUT7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms