Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Gm24589-201ENSMUST00000116692 94 ntBASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Gm8344-201ENSMUST00000119813 856 ntBASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RpgrQ9R0X5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RpgrQ9R0X5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Rps4l-201ENSMUST00000071745 943 ntBASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RpgrQ9R0X5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.36■□□□□ 0.05
RpgrQ9R0X5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms