Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm44454-201ENSMUST00000198541 138 ntBASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Gm18622-201ENSMUST00000219361 595 ntBASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf13bQ9ET35 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf13bQ9ET35 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm12008-201ENSMUST00000117791 755 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm8344-201ENSMUST00000119813 856 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Rprl3-201ENSMUST00000157400 290 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm17808-201ENSMUST00000200859 894 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf13bQ9ET35 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf13bQ9ET35 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms