Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Gm24513-201ENSMUST00000174964 138 ntBASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Gm43575-201ENSMUST00000196420 516 ntBASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdc40Q9DC48 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Gm5682-201ENSMUST00000173402 505 ntBASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdc40Q9DC48 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Gm37153-201ENSMUST00000193637 231 ntBASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Gm2756-201ENSMUST00000195851 400 ntBASIC14.03□□□□□ -0.16
Cdc40Q9DC48 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Gm45167-201ENSMUST00000208007 322 ntBASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdc40Q9DC48 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdc40Q9DC48 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdc40Q9DC48 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.02□□□□□ -0.17
Cdc40Q9DC48 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms