Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm15165-201ENSMUST00000118140 502 ntBASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp5Q9D7S9 Carlr-201ENSMUST00000181515 2574 ntBASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Gm4459-201ENSMUST00000118750 468 ntBASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Celf4-206ENSMUST00000224553 1729 ntBASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp5Q9D7S9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp5Q9D7S9 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.89■□□□□ 0.62
Chmp5Q9D7S9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp5Q9D7S9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp5Q9D7S9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms