Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.6■□□□□ 0.25
Cfap53Q9D439 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 BC037039-201ENSMUST00000192003 2205 ntBASIC16.6■□□□□ 0.25
Cfap53Q9D439 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm11764-201ENSMUST00000120221 623 ntBASIC16.59■□□□□ 0.25
Cfap53Q9D439 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm9682-201ENSMUST00000197505 556 ntBASIC16.59■□□□□ 0.25
Cfap53Q9D439 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.59■□□□□ 0.25
Cfap53Q9D439 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Cfap53Q9D439 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap53Q9D439 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap53Q9D439 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap53Q9D439 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Cfap53Q9D439 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Gm5682-201ENSMUST00000173402 505 ntBASIC16.58■□□□□ 0.24
Cfap53Q9D439 Gm10499-201ENSMUST00000174094 934 ntBASIC16.58■□□□□ 0.24
Cfap53Q9D439 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.58■□□□□ 0.24
Cfap53Q9D439 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap53Q9D439 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.57■□□□□ 0.24
Cfap53Q9D439 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.57■□□□□ 0.24
Cfap53Q9D439 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.57■□□□□ 0.24
Cfap53Q9D439 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 AV026068-213ENSMUST00000223675 1171 ntBASIC16.57■□□□□ 0.24
Cfap53Q9D439 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap53Q9D439 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cfap53Q9D439 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cfap53Q9D439 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap53Q9D439 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap53Q9D439 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap53Q9D439 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap53Q9D439 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms