Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chaf1bQ9D0N7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Gm15565-201ENSMUST00000118890 427 ntBASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1bQ9D0N7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.22□□□□□ -0.13
Chaf1bQ9D0N7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.21□□□□□ -0.13
Chaf1bQ9D0N7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chaf1bQ9D0N7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chaf1bQ9D0N7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chaf1bQ9D0N7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chaf1bQ9D0N7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms