Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.08□□□□□ -0.31
Hcfc1r1Q9CYQ5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hcfc1r1Q9CYQ5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm18032-201ENSMUST00000222541 538 ntBASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Celf4-206ENSMUST00000224553 1729 ntBASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hcfc1r1Q9CYQ5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm12008-201ENSMUST00000117791 755 ntBASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm15565-201ENSMUST00000118890 427 ntBASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.06□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms