Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm27533-201ENSMUST00000183800 152 ntBASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm43767-201ENSMUST00000198933 381 ntBASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nip7Q9CXK8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Gm15487-201ENSMUST00000122373 465 ntBASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Celf4-206ENSMUST00000224553 1729 ntBASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nip7Q9CXK8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Nip7Q9CXK8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Gm44344-201ENSMUST00000200287 129 ntBASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Gm7730-201ENSMUST00000212486 454 ntBASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nip7Q9CXK8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Gm13823-201ENSMUST00000119930 345 ntBASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Gm14719-201ENSMUST00000121891 340 ntBASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Gm27680-201ENSMUST00000184192 160 ntBASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nip7Q9CXK8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms