Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm42612-201ENSMUST00000197986 623 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm43170-201ENSMUST00000199827 612 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cldnd1Q9CQX5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Mir7085-201ENSMUST00000184353 66 ntBASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Gm44719-201ENSMUST00000206404 149 ntBASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cldnd1Q9CQX5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Gm43703-201ENSMUST00000200523 763 ntBASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cldnd1Q9CQX5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms