Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gm13597-201ENSMUST00000121239 375 ntBASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gm7787-201ENSMUST00000216858 688 ntBASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retreg3Q9CQV4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm15626-201ENSMUST00000117478 868 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm19080-201ENSMUST00000196082 550 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm35638-201ENSMUST00000220724 652 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Celf4-206ENSMUST00000224553 1729 ntBASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retreg3Q9CQV4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gm18246-201ENSMUST00000221023 728 ntBASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gm14667-201ENSMUST00000119448 1350 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms