Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm14701-201ENSMUST00000117156 348 ntBASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm9385-201ENSMUST00000117563 472 ntBASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Rpph1-201ENSMUST00000175096 319 ntBASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Dancr-204ENSMUST00000132389 2347 ntBASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm7Q9CQQ8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.22■□□□□ 0.03
Lsm7Q9CQQ8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm7Q9CQQ8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Lsm7Q9CQQ8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Lsm7Q9CQQ8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.02
Lsm7Q9CQQ8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms