Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTRAFQ9CQE8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Mir1199-201ENSMUST00000117015 119 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm11336-201ENSMUST00000118168 334 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm27463-201ENSMUST00000183569 57 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.32□□□□□ -0.44
RTRAFQ9CQE8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTRAFQ9CQE8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms