Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
2210010C04RikQ9CPN9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
2210010C04RikQ9CPN9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
2210010C04RikQ9CPN9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
2210010C04RikQ9CPN9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Gm44454-201ENSMUST00000198541 138 ntBASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Gm10819-201ENSMUST00000099988 561 ntBASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
2210010C04RikQ9CPN9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm25406-201ENSMUST00000157599 105 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm8825-201ENSMUST00000182565 998 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm4518-201ENSMUST00000182638 718 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm27357-201ENSMUST00000183754 135 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.09□□□□□ -0.31
2210010C04RikQ9CPN9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms