Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gm18733-201ENSMUST00000173950 856 ntBASIC14.99□□□□□ -0.01
Trim33Q99PP7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trim33Q99PP7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.99□□□□□ -0.01
Trim33Q99PP7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.99□□□□□ -0.01
Trim33Q99PP7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim33Q99PP7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim33Q99PP7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.98□□□□□ -0.01
Trim33Q99PP7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim33Q99PP7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm18489-201ENSMUST00000172565 551 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm8318-201ENSMUST00000182954 872 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.97□□□□□ -0.01
Trim33Q99PP7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim33Q99PP7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms