Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.84□□□□□ -0.03
Trim8Q99PJ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim8Q99PJ2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim8Q99PJ2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim8Q99PJ2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Mir3081-201ENSMUST00000175305 84 ntBASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim8Q99PJ2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms