Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.73□□□□□ -0.05
Msh4Q99MT2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.73□□□□□ -0.05
Msh4Q99MT2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.73□□□□□ -0.05
Msh4Q99MT2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Msh4Q99MT2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.72□□□□□ -0.05
Msh4Q99MT2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Gm13036-201ENSMUST00000117799 748 ntBASIC14.72□□□□□ -0.05
Msh4Q99MT2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Gm19164-201ENSMUST00000210667 640 ntBASIC14.72□□□□□ -0.05
Msh4Q99MT2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.72□□□□□ -0.05
Msh4Q99MT2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Msh4Q99MT2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh4Q99MT2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.71□□□□□ -0.05
Msh4Q99MT2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Grk6-207ENSMUST00000225925 2769 ntBASIC14.71□□□□□ -0.05
Msh4Q99MT2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.71□□□□□ -0.05
Msh4Q99MT2 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.71□□□□□ -0.05
Msh4Q99MT2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh4Q99MT2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.71□□□□□ -0.05
Msh4Q99MT2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Msh4Q99MT2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh4Q99MT2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms