Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col25a1Q99MQ5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm6973-201ENSMUST00000117080 721 ntBASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm12008-201ENSMUST00000117791 755 ntBASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col25a1Q99MQ5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Mir6404-201ENSMUST00000183699 94 ntBASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Gm29541-201ENSMUST00000191351 678 ntBASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col25a1Q99MQ5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm2810-201ENSMUST00000118681 990 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm17420-201ENSMUST00000164753 153 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm37917-201ENSMUST00000194711 392 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col25a1Q99MQ5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col25a1Q99MQ5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms