Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdca3Q99M54 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Sybu-209ENSMUST00000228639 4113 ntBASIC14.04□□□□□ -0.16
Cdca3Q99M54 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.04□□□□□ -0.16
Cdca3Q99M54 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.04□□□□□ -0.16
Cdca3Q99M54 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.04□□□□□ -0.16
Cdca3Q99M54 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.04□□□□□ -0.16
Cdca3Q99M54 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cdca3Q99M54 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gm14701-201ENSMUST00000117156 348 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Mir8117-201ENSMUST00000184773 107 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gm9172-201ENSMUST00000212092 954 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gm10175-201ENSMUST00000086013 645 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.03□□□□□ -0.16
Cdca3Q99M54 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdca3Q99M54 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms