Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm11452-201ENSMUST00000122376 690 ntBASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Chmp1b1Q99LU0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Gm18195-201ENSMUST00000207604 706 ntBASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Mzt1-203ENSMUST00000227948 952 ntBASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1b1Q99LU0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chmp1b1Q99LU0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms