Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha11Q91Y19 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha11Q91Y19 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha11Q91Y19 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms