Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb2Q91Y00 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb2Q91Y00 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gm12008-201ENSMUST00000117791 755 ntBASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb2Q91Y00 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Gm37935-201ENSMUST00000192012 982 ntBASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb2Q91Y00 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdhb2Q91Y00 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb2Q91Y00 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms