Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb3Q91XZ7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb3Q91XZ7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Gm42660-201ENSMUST00000197733 947 ntBASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb3Q91XZ7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 CT009764.1-201ENSMUST00000222260 483 ntBASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb3Q91XZ7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms