Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb4Q91XZ6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb4Q91XZ6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb4Q91XZ6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Gm8097-201ENSMUST00000117903 829 ntBASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb4Q91XZ6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb4Q91XZ6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb4Q91XZ6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms