Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhga3Q91XY5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga3Q91XY5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga3Q91XY5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhga3Q91XY5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm24589-201ENSMUST00000116692 94 ntBASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm14722-201ENSMUST00000118943 689 ntBASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm4535-201ENSMUST00000182274 558 ntBASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm17971-201ENSMUST00000190239 806 ntBASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm10355-201ENSMUST00000097146 517 ntBASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhga3Q91XY5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhga3Q91XY5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Gm7153-201ENSMUST00000117092 455 ntBASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Gm15358-201ENSMUST00000119249 520 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms