Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 App-207ENSMUST00000227737 2827 ntBASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga4Q91XY4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga4Q91XY4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga4Q91XY4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Gm14140-201ENSMUST00000119999 995 ntBASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 AW822252-206ENSMUST00000208904 237 ntBASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga4Q91XY4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms