Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Gm27301-201ENSMUST00000184012 127 ntBASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc5Q91XW9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhgc5Q91XW9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Pcdhgc5Q91XW9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc5Q91XW9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Mir7023-201ENSMUST00000185093 64 ntBASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc5Q91XW9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms