Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgms1Q8VCQ6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Mir5126-201ENSMUST00000175513 77 ntBASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgms1Q8VCQ6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Gm13036-201ENSMUST00000117799 748 ntBASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Gm18246-201ENSMUST00000221023 728 ntBASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgms1Q8VCQ6 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgms1Q8VCQ6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sgms1Q8VCQ6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sgms1Q8VCQ6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms