Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Gm18195-201ENSMUST00000207604 706 ntBASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim29Q8R2Q0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim29Q8R2Q0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.27■□□□□ 0.35
Trim29Q8R2Q0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim29Q8R2Q0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim29Q8R2Q0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim29Q8R2Q0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Trim29Q8R2Q0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim29Q8R2Q0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms