Protein–RNA interactions for Protein: Q8QZY9

Sf3b4, Splicing factor 3B subunit 4, mousemouse

Known RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4Q8QZY9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b4Q8QZY9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b4Q8QZY9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b4Q8QZY9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b4Q8QZY9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Sf3b4Q8QZY9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b4Q8QZY9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b4Q8QZY9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b4Q8QZY9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms