Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx54Q8K4L0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Gm5479-201ENSMUST00000160578 435 ntBASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx54Q8K4L0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx54Q8K4L0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Gm27631-201ENSMUST00000184163 466 ntBASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx54Q8K4L0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Gm6222-201ENSMUST00000120787 396 ntBASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms