Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Gm715-201ENSMUST00000117865 831 ntBASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.8□□□□□ -0.2
Ebf4Q8K4J2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm16061-201ENSMUST00000122167 857 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm13474-201ENSMUST00000122466 815 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.79□□□□□ -0.2
Ebf4Q8K4J2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf4Q8K4J2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf4Q8K4J2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms