Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clrn1Q8K445 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.27□□□□□ -0.12
Clrn1Q8K445 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn1Q8K445 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gm18733-201ENSMUST00000173950 856 ntBASIC14.27□□□□□ -0.13
Clrn1Q8K445 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.27□□□□□ -0.13
Clrn1Q8K445 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.13
Clrn1Q8K445 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.26□□□□□ -0.13
Clrn1Q8K445 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.26□□□□□ -0.13
Clrn1Q8K445 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.26□□□□□ -0.13
Clrn1Q8K445 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn1Q8K445 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.25□□□□□ -0.13
Clrn1Q8K445 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms