Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cnot3Q8K0V4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cnot3Q8K0V4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Cnot3Q8K0V4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cnot3Q8K0V4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cnot3Q8K0V4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm43799-201ENSMUST00000201845 579 ntBASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cnot3Q8K0V4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms