Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtn1Q8K0T0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rtn1Q8K0T0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 AW822252-206ENSMUST00000208904 237 ntBASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn1Q8K0T0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rtn1Q8K0T0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rtn1Q8K0T0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rtn1Q8K0T0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Gm12008-201ENSMUST00000117791 755 ntBASIC17.39■□□□□ 0.37
Rtn1Q8K0T0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms