Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm7230-201ENSMUST00000173026 815 ntBASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Mir5131-201ENSMUST00000175426 93 ntBASIC15.25■□□□□ 0.03
Clip4Q8CI96 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clip4Q8CI96 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.24■□□□□ 0.03
Clip4Q8CI96 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clip4Q8CI96 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clip4Q8CI96 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Gm15173-201ENSMUST00000122049 433 ntBASIC15.22■□□□□ 0.03
Clip4Q8CI96 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.22■□□□□ 0.03
Clip4Q8CI96 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms