Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox30Q8CGW4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox30Q8CGW4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox30Q8CGW4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox30Q8CGW4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox30Q8CGW4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sox30Q8CGW4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox30Q8CGW4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms