Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.7■□□□□ 0.58
Smc5Q8CG46 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.7■□□□□ 0.58
Smc5Q8CG46 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Gm12644-201ENSMUST00000119935 606 ntBASIC18.69■□□□□ 0.58
Smc5Q8CG46 Gm13836-201ENSMUST00000121159 501 ntBASIC18.69■□□□□ 0.58
Smc5Q8CG46 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Gm33142-201ENSMUST00000193913 867 ntBASIC18.69■□□□□ 0.58
Smc5Q8CG46 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.69■□□□□ 0.58
Smc5Q8CG46 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc5Q8CG46 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.68■□□□□ 0.58
Smc5Q8CG46 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.68■□□□□ 0.58
Smc5Q8CG46 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.68■□□□□ 0.58
Smc5Q8CG46 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc5Q8CG46 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.67■□□□□ 0.58
Smc5Q8CG46 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.67■□□□□ 0.58
Smc5Q8CG46 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc5Q8CG46 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms