Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm18195-201ENSMUST00000207604 706 ntBASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcpip1Q8CDG3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Gm37935-201ENSMUST00000192012 982 ntBASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcpip1Q8CDG3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vcpip1Q8CDG3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms