Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pabpn1Q8CCS6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Gm6944-201ENSMUST00000182449 1006 ntBASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC23.03■■□□□ 1.28
Pabpn1Q8CCS6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gm37986-201ENSMUST00000193285 383 ntBASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gm5161-201ENSMUST00000075243 853 ntBASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pabpn1Q8CCS6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Gm24514-201ENSMUST00000174961 285 ntBASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Gm37259-201ENSMUST00000193903 849 ntBASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Gm12846-201ENSMUST00000120431 1373 ntBASIC23.01■■□□□ 1.27
Pabpn1Q8CCS6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Gm5363-201ENSMUST00000211927 938 ntBASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pabpn1Q8CCS6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms