Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm9682-201ENSMUST00000197505 556 ntBASIC17.78■□□□□ 0.44
E4f1Q8CCE9 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.78■□□□□ 0.44
E4f1Q8CCE9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Gm11025-201ENSMUST00000140773 466 ntBASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.77■□□□□ 0.44
E4f1Q8CCE9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
E4f1Q8CCE9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
E4f1Q8CCE9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Gm18489-201ENSMUST00000172565 551 ntBASIC17.75■□□□□ 0.43
E4f1Q8CCE9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Gm19164-201ENSMUST00000210667 640 ntBASIC17.75■□□□□ 0.43
E4f1Q8CCE9 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E4f1Q8CCE9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Grk6-207ENSMUST00000225925 2769 ntBASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
E4f1Q8CCE9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms