Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm9949Q8C9F4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 AV026068-213ENSMUST00000223675 1171 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm15590-201ENSMUST00000078419 552 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.92□□□□□ -0.5
Gm9949Q8C9F4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Gm13036-201ENSMUST00000117799 748 ntBASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm9949Q8C9F4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm9949Q8C9F4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms