Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ska3Q8C263 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.22□□□□□ -0.13
Ska3Q8C263 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska3Q8C263 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska3Q8C263 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska3Q8C263 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.21□□□□□ -0.13
Ska3Q8C263 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska3Q8C263 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.21□□□□□ -0.13
Ska3Q8C263 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Psmb5-202ENSMUST00000227257 622 ntBASIC14.21□□□□□ -0.13
Ska3Q8C263 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska3Q8C263 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska3Q8C263 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.2□□□□□ -0.14
Ska3Q8C263 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ska3Q8C263 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ska3Q8C263 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.2□□□□□ -0.14
Ska3Q8C263 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ska3Q8C263 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska3Q8C263 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Gm14140-201ENSMUST00000119999 995 ntBASIC14.19□□□□□ -0.14
Ska3Q8C263 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.19□□□□□ -0.14
Ska3Q8C263 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ska3Q8C263 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska3Q8C263 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms