Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Gm15358-201ENSMUST00000119249 520 ntBASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.67□□□□□ -0.38
Smim4Q8C1Q6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gm8097-201ENSMUST00000117903 829 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gm12644-201ENSMUST00000119935 606 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim4Q8C1Q6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.65□□□□□ -0.38
Smim4Q8C1Q6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms